Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC103134408L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily. (355 aa)    
Predicted Functional Partners:
got2
Aspartate aminotransferase.
   
 0.985
GOT1
Aspartate aminotransferase.
   
 0.978
ENSPFOP00000012577
Aspartate aminotransferase.
   
 0.978
LOC103136622
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.977
LOC103130154
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.977
LOC103138114
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.977
PC
Pyruvate carboxylase b.
  
 0.975
pdhb
Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
  
 0.974
LOC103140321
Malic enzyme.
  
 0.962
LOC103135426
Malic enzyme.
  
 0.962
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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