STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mycbpUncharacterized protein. (104 aa)    
Predicted Functional Partners:
lrguk
Leucine-rich repeats and guanylate kinase domain containing.
    
 
 0.860
ENSPFOP00000015912
WD repeat domain 90.
    
   0.769
mycbpap
Mycbp associated protein.
    
 
 0.757
pgk1
Phosphoglycerate kinase.
    
 
 0.692
polr3c
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.610
ENSPFOP00000019125
Spermatogenesis associated 4.
    
   0.610
cfap69
Uncharacterized protein.
    
   0.610
ENSPFOP00000015134
Uncharacterized protein.
    
 
 0.609
ENSPFOP00000031071
Uncharacterized protein.
    
 
 0.609
yars1
Tyrosine--tRNA ligase.
      
 0.608
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
Server load: medium (66%) [HD]