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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103144605Vang-like protein. (525 aa)    
Predicted Functional Partners:
ENSPFOP00000010227
Uncharacterized protein.
    
 0.981
dvl2
Dishevelled segment polarity protein 2.
    
 0.976
PRICKLE1
Prickle homolog 1a.
    
 0.976
prickle2
Prickle homolog 2b.
    
 0.975
LOC103145047
Prickle homolog 2a.
    
 0.975
LOC103156826
Prickle homolog 1b.
    
 0.975
LOC103147008
Dishevelled segment polarity protein 3a.
    
 0.970
ENSPFOP00000004140
Prickle homolog 3.
    
 0.961
DVL1
Dishevelled segment polarity protein 1.
    
 0.960
ENSPFOP00000003910
annotation not available
    
 0.960
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.