Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sgsm2Small G protein signaling modulator 2. (1024 aa)    
Predicted Functional Partners:
ENSPFOP00000017245
Uncharacterized protein.
    
   0.669
ENSPFOP00000017250
annotation not available
    
   0.669
cetn2
Centrin, EF-hand protein, 2.
    
   0.620
LOC103137297
Centrin 4.
    
   0.620
RUNDC1
RUN domain containing 1.
    
 
 0.561
pex1
Peroxisomal biogenesis factor 1.
      
 0.542
LOC103135635
RAB9B, member RAS oncogene family.
    
 
 0.529
ENSPFOP00000020269
Uncharacterized protein.
    
 
 0.529
RAB9A
RAB9A, member RAS oncogene family.
    
 
 0.529
glt1d1
Glycosyltransferase 1 domain containing 1.
      
 0.500
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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