STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000001993Ig-like domain-containing protein; Belongs to the MHC class I family. (277 aa)    
Predicted Functional Partners:
LOC103129860
Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system.
   
 0.926
LOC103135288
Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system.
   
 0.917
LOC103138474
Calreticulin.
    
 0.872
pdia3
Protein disulfide-isomerase.
    
  0.870
LOC103139595
Ig-like domain-containing protein.
    
 0.869
ENSPFOP00000002156
Calreticulin.
    
 0.861
ENSPFOP00000010680
Cd8 beta.
     
 0.837
LOC103147914
Protein disulfide-isomerase.
    
  0.829
LOC103146386
TAP binding protein (tapasin), tandem duplicate 2.
   
 0.797
LOC103142380
RPA_C domain-containing protein.
   
 0.785
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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