ENSPFOP00000001997 protein (Poecilia formosa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ENSPFOP00000001997

ATP-binding cassette, sub-family A (ABC1), member 12. (2519 aa)

Predicted Functional Partners:

ABCA5

0.740

ENSPFOP00000012418

0.729

LOC103130810

0.725

abcd4

0.714

ints13

0.710

MOCOS

0.704

scel

0.691

LOC103149439

0.686

ENSPFOP00000000728

0.676

ENSPFOP00000013278

0.656

Your Current Organism:

Poecilia formosa

NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABCA5	ENSPFOP00000001997	ENSPFOP00000002490	ENSPFOP00000001997	ATP binding cassette subfamily A member 5.	ATP-binding cassette, sub-family A (ABC1), member 12.	0.740
ABCA5	abcd4	ENSPFOP00000002490	ENSPFOP00000006819	ATP binding cassette subfamily A member 5.	ATP-binding cassette, sub-family D (ALD), member 4.	0.720
ENSPFOP00000000728	ENSPFOP00000001997	ENSPFOP00000000728	ENSPFOP00000001997	Zgc:101583.	ATP-binding cassette, sub-family A (ABC1), member 12.	0.676
ENSPFOP00000001997	ABCA5	ENSPFOP00000001997	ENSPFOP00000002490	ATP-binding cassette, sub-family A (ABC1), member 12.	ATP binding cassette subfamily A member 5.	0.740
ENSPFOP00000001997	ENSPFOP00000000728	ENSPFOP00000001997	ENSPFOP00000000728	ATP-binding cassette, sub-family A (ABC1), member 12.	Zgc:101583.	0.676
ENSPFOP00000001997	ENSPFOP00000012418	ENSPFOP00000001997	ENSPFOP00000012418	ATP-binding cassette, sub-family A (ABC1), member 12.	ATP-binding cassette, sub-family F (GCN20), member 2b.	0.729
ENSPFOP00000001997	ENSPFOP00000013278	ENSPFOP00000001997	ENSPFOP00000013278	ATP-binding cassette, sub-family A (ABC1), member 12.	Uncharacterized protein.	0.656
ENSPFOP00000001997	LOC103130810	ENSPFOP00000001997	ENSPFOP00000017891	ATP-binding cassette, sub-family A (ABC1), member 12.	NIPA like domain containing 4.	0.725
ENSPFOP00000001997	LOC103149439	ENSPFOP00000001997	ENSPFOP00000020336	ATP-binding cassette, sub-family A (ABC1), member 12.	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.	0.686
ENSPFOP00000001997	MOCOS	ENSPFOP00000001997	ENSPFOP00000002920	ATP-binding cassette, sub-family A (ABC1), member 12.	Molybdenum cofactor sulfurase; Sulfurates the molybdenum cofactor. Sulfation of molybdenum is essential for xanthine dehydrogenase (XDH) and aldehyde oxidase (ADO) enzymes in which molybdenum cofactor is liganded by 1 oxygen and 1 sulfur atom in active form.	0.704
ENSPFOP00000001997	abcd4	ENSPFOP00000001997	ENSPFOP00000006819	ATP-binding cassette, sub-family A (ABC1), member 12.	ATP-binding cassette, sub-family D (ALD), member 4.	0.714
ENSPFOP00000001997	ints13	ENSPFOP00000001997	ENSPFOP00000016457	ATP-binding cassette, sub-family A (ABC1), member 12.	Integrator complex subunit 13.	0.710
ENSPFOP00000001997	scel	ENSPFOP00000001997	ENSPFOP00000009301	ATP-binding cassette, sub-family A (ABC1), member 12.	LIM zinc-binding domain-containing protein.	0.691
ENSPFOP00000012418	ENSPFOP00000001997	ENSPFOP00000012418	ENSPFOP00000001997	ATP-binding cassette, sub-family F (GCN20), member 2b.	ATP-binding cassette, sub-family A (ABC1), member 12.	0.729
ENSPFOP00000012418	abcd4	ENSPFOP00000012418	ENSPFOP00000006819	ATP-binding cassette, sub-family F (GCN20), member 2b.	ATP-binding cassette, sub-family D (ALD), member 4.	0.693
ENSPFOP00000013278	ENSPFOP00000001997	ENSPFOP00000013278	ENSPFOP00000001997	Uncharacterized protein.	ATP-binding cassette, sub-family A (ABC1), member 12.	0.656
LOC103130810	ENSPFOP00000001997	ENSPFOP00000017891	ENSPFOP00000001997	NIPA like domain containing 4.	ATP-binding cassette, sub-family A (ABC1), member 12.	0.725
LOC103149439	ENSPFOP00000001997	ENSPFOP00000020336	ENSPFOP00000001997	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.	ATP-binding cassette, sub-family A (ABC1), member 12.	0.686
MOCOS	ENSPFOP00000001997	ENSPFOP00000002920	ENSPFOP00000001997	Molybdenum cofactor sulfurase; Sulfurates the molybdenum cofactor. Sulfation of molybdenum is essential for xanthine dehydrogenase (XDH) and aldehyde oxidase (ADO) enzymes in which molybdenum cofactor is liganded by 1 oxygen and 1 sulfur atom in active form.	ATP-binding cassette, sub-family A (ABC1), member 12.	0.704
MOCOS	ints13	ENSPFOP00000002920	ENSPFOP00000016457	Molybdenum cofactor sulfurase; Sulfurates the molybdenum cofactor. Sulfation of molybdenum is essential for xanthine dehydrogenase (XDH) and aldehyde oxidase (ADO) enzymes in which molybdenum cofactor is liganded by 1 oxygen and 1 sulfur atom in active form.	Integrator complex subunit 13.	0.666