Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC103155899SCO cytochrome c oxidase assembly protein 1. (303 aa)    
Predicted Functional Partners:
ENSPFOP00000018198
Cytochrome c oxidase copper chaperone COX17.
   
 0.964
LOC103147078
Cytochrome c oxidase assembly homolog 11 (yeast).
  
 0.956
LOC103152227
Cytochrome c oxidase assembly homolog 15 (yeast).
  
 0.953
ndufs7
NADH:ubiquinone oxidoreductase core subunit S7; Belongs to the complex I 20 kDa subunit family.
   
 
 0.844
LOC103143717
Cytochrome c oxidase assembly factor COX19.
  
 
 0.834
LOC103135929
SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family.
  
 
 0.824
LOC103135929-2
Surfeit locus protein 1-like.
  
 
 0.824
ENSPFOP00000012075
Cytochrome c oxidase assembly factor 6.
   
 
 0.820
LOC103142209
Si:ch73-141c7.1.
   
 
 0.812
LOC103131000
Uncharacterized protein.
  
 
 0.792
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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