Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC103142269Crystallin, gamma MX, like 2; Belongs to the beta/gamma-crystallin family. (175 aa)    
Predicted Functional Partners:
LOC103130070
Lens intrinsic membrane protein 2.2.
      
 0.710
ENSPFOP00000017281
Urotensin-related peptide 1.
      
 0.682
gal
Galanin/GMAP prepropeptide.
      
 0.650
LOC103146889
Growth hormone 1.
   
  
 0.547
LOC103145348
Somatolactin alpha.
   
    0.545
LOC103149040
Crystallin, alpha A; Belongs to the small heat shock protein (HSP20) family.
   
 
 0.510
ENSPFOP00000004898
Carboxypeptidase B2 (plasma).
      
 0.478
LOC103134261
Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate.
      
 0.478
crybb2
Crystallin, beta B2; Belongs to the beta/gamma-crystallin family.
   
 
 0.439
lgsn
Lengsin, lens protein with glutamine synthetase domain; Belongs to the glutamine synthetase family.
   
  
 0.434
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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