STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000002016Rho GTPase activating protein 23a. (1416 aa)    
Predicted Functional Partners:
rhof
Ras homolog family member F.
    
 0.574
LOC103154003
Uncharacterized protein.
    
 0.541
LOC103149604
Uncharacterized protein.
    
 0.541
LOC103141407
Rho family GTPase 3a.
    
 0.541
LOC103149647
Uncharacterized protein.
    
 0.541
RND1
Rho family GTPase 1.
    
 0.541
LOC103141170
Rho family GTPase 1b.
    
 0.541
LOC103134577
Ras homolog family member Ca.
    
 0.541
ENSPFOP00000015055
Rho family GTPase 3a.
    
 0.541
LOC103154239
Uncharacterized protein.
    
 0.541
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.