Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000002016Rho GTPase activating protein 23a. (1416 aa)    
Predicted Functional Partners:
ccdc51
Coiled-coil domain containing 51.
      
 0.677
krtcap2
Keratinocyte associated protein 2.
      
 0.559
etf1
Eukaryotic translation termination factor 1b.
      
 0.555
rhof
Ras homolog family member F.
    
 0.550
LOC103154003
Uncharacterized protein.
    
 0.506
LOC103149604
Uncharacterized protein.
    
 0.506
LOC103149647
Uncharacterized protein.
    
 0.506
LOC103134577
Ras homolog family member Ca.
    
 0.506
LOC103154239
Uncharacterized protein.
    
 0.506
LOC103138302
Uncharacterized protein.
    
 0.506
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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