Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC103135495Si:ch211-203d1.3. (632 aa)    
Predicted Functional Partners:
cfl1
Cofilin 1; Belongs to the actin-binding proteins ADF family.
    
 0.968
cfl2
Cofilin 2 (muscle); Belongs to the actin-binding proteins ADF family.
    
 0.968
dstn
ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family.
    
 0.927
nmd3
60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family.
   
 
 0.709
ENSPFOP00000009929
LIM domain kinase 2.
   
 0.665
limk1
LIM domain kinase 1b.
   
 0.665
LOC103155194
LIM domain kinase 1a.
   
 0.665
ENSPFOP00000017899
Tropomodulin 2.
    
 
 0.578
ENSPFOP00000012389
Transient receptor potential cation channel, subfamily V, member 6; Belongs to the transient receptor (TC 1.A.4) family.
      
 0.577
mmab
Corrinoid adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family.
      
 0.547
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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