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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103135495Si:ch211-203d1.3. (632 aa)    
Predicted Functional Partners:
cfl2
Cofilin 2 (muscle); Belongs to the actin-binding proteins ADF family.
    
 0.962
cfl1
Cofilin 1; Belongs to the actin-binding proteins ADF family.
    
 0.946
dstn
ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family.
    
 0.943
LOC103149004
Slingshot protein phosphatase 1b.
  
  
 
0.708
LOC103139565
Slingshot protein phosphatase 2b.
  
  
 
0.645
ENSPFOP00000000720
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.644
stk38l
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.644
LOC103148121
Slingshot protein phosphatase 2a.
  
  
 
0.643
LOC103134016
Mitogen-activated protein kinase.
   
 0.641
mapk10
Mitogen-activated protein kinase.
   
 0.641
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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