Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC103144082THAP-type domain-containing protein. (517 aa)    
Predicted Functional Partners:
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.781
ENSPFOP00000000899
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
   
 0.696
cask
Uncharacterized protein; Belongs to the MAGUK family.
   
 0.696
LOC103155772
NME/NM23 family member 8; Belongs to the NDK family.
   
 0.667
ENSPFOP00000003242
TROVE domain-containing protein.
   
 0.621
ENSPFOP00000028292
WD_REPEATS_REGION domain-containing protein.
   
 0.621
eloc
Elongin C paralog a; Belongs to the SKP1 family.
   
  0.619
has3
Hyaluronan synthase 3.
  
 0.608
LOC103143133
Hyaluronan synthase 1.
  
 0.608
ENSPFOP00000019182
Hyaluronan synthase 2.
  
 0.608
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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