Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000002133Uncharacterized protein. (221 aa)    
Predicted Functional Partners:
ENSPFOP00000002689
Troponin I type 1a (skeletal, slow).
  
 0.940
ENSPFOP00000014290
Troponin I type 1b (skeletal, slow).
  
 0.926
TNNI2
Troponin I type 2b (skeletal, fast), tandem duplicate 1.
  
 0.915
TNNI2-3
Uncharacterized protein.
  
 0.910
ENSPFOP00000031128
Troponin T type 1 (skeletal, slow).
  
  
 
0.901
TNNI2-2
Troponin I2, fast skeletal type.
   
 0.892
TNNI2-4
Uncharacterized protein.
   
 0.892
ENSPFOP00000002538
Troponin I4b, tandem duplicate 2.
  
 0.885
ENSPFOP00000002549
Uncharacterized protein.
  
 0.885
myl1
Myosin, light chain 1, alkali; skeletal, fast.
   
 0.883
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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