Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ognOsteoglycin, paralog a. (280 aa)    
Predicted Functional Partners:
cnpy3
Canopy FGF signaling regulator 3.
    
  0.804
LOC103155740
Asporin.
   
 
 0.798
prelp
Proline/arginine-rich end leucine-rich repeat protein.
   
 
 0.778
ENSPFOP00000008538
Decorin; May affect the rate of fibrils formation.
   
  
 0.771
ENSPFOP00000028990
Olfactomedin-like 3b.
   
 
 0.770
bgn
Biglycan; May be involved in collagen fiber assembly. Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily.
   
 
 0.762
LOC103145053
Fibromodulin b.
   
 
 0.752
LOC103144314
Fibromodulin a.
   
 
 0.752
lum
Keratocan.
   
 
 0.749
LOC103140233
Pleiotrophin.
   
 
 0.716
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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