Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ENSPFOP00000002149Tax1 (human T-cell leukemia virus type I) binding protein 1a. (757 aa)    
Predicted Functional Partners:
sqstm1
Sequestosome 1.
    
 0.983
tnfaip3
Tumor necrosis factor, alpha-induced protein 3.
    
 0.972
ENSPFOP00000026086
SKICH domain-containing protein.
  
 
0.969
map1lc3c
Microtubule-associated protein 1 light chain 3 gamma.
    
 0.967
gabarapl2
GABA(A) receptor-associated protein like 2.
   
 0.963
GABARAPL2
GABA type A receptor associated protein like 2.
   
 0.963
rps27a
Ribosomal protein S27a.
    
  0.958
optn
Optineurin.
   
 0.957
map1lc3b
Microtubule-associated protein 1 light chain 3 beta.
   
 0.945
map1lc3a
Microtubule-associated protein 1 light chain 3 alpha.
   
 0.945
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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