Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103155825Si:ch73-111k22.2. (355 aa)    
Predicted Functional Partners:
LOC103145074
Cytochrome c oxidase subunit 7C.
   
 0.992
ENSPFOP00000010733
Ubiquinol-cytochrome c reductase, complex III subunit VII.
   
 0.987
LOC103135126
Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family.
   
 0.987
ENSPFOP00000019915
Ubiquinol-cytochrome c reductase, complex III subunit X.
   
 0.986
LOC103156966
Cytochrome c-1.
   
 0.982
LOC103156115
Cytochrome c oxidase subunit 4I2.
   
 0.976
ENSPFOP00000013329
Cytochrome c oxidase subunit 6A, mitochondrial.
   
 0.976
ENSPFOP00000013358
Cytochrome c oxidase subunit 6A, mitochondrial.
   
 0.976
LOC103136558
Cytochrome c oxidase subunit 4I1.
   
 0.976
UQCRFS1
Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
   
 0.973
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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