Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
clec11aC-type lectin domain containing 11A. (268 aa)    
Predicted Functional Partners:
ENSPFOP00000017355
NudC domain containing 1.
    
   0.880
ENSPFOP00000013453
Thioredoxin domain containing 11.
     
 0.719
cep85
Centrosomal protein 85.
    
  0.662
LOC103139935
X-linked inhibitor of apoptosis.
    
   0.555
LOC103145052
Colony stimulating factor 1b (macrophage).
      
 0.554
galc
Galactosylceramidase b.
    
   0.549
LOC103154503
Zmp:0000000846.
   
  0.537
LOC103141903
Tenascin C.
   
  0.537
LOC103137421
Synaptopodin 2-like a.
    
 
 0.530
tnr
Tenascin R (restrictin, janusin).
   
  0.524
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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