Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000002189Matrix-remodelling associated 5a. (2771 aa)    
Predicted Functional Partners:
pudp
Pseudouridine 5'-phosphatase.
      
 0.642
gtpbp6
GTP binding protein 6 (putative).
     
 0.619
ENSPFOP00000004239
A kinase (PRKA) anchor protein 17A.
      
 0.614
pnpla4
PNPLA domain-containing protein.
      
 0.597
ANOS1
Anosmin 1.
      
 0.580
fam136a
Family with sequence similarity 136 member A.
      
 0.579
ENSPFOP00000015912
WD repeat domain 90.
    
  0.476
sts
Steroid sulfatase (microsomal), isozyme S.
      
 0.474
ENSPFOP00000009082
Arylsulfatase H.
      
 0.474
eloc
Elongin C paralog a; Belongs to the SKP1 family.
    
  0.430
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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