Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
snd1Staphylococcal nuclease domain-containing protein; Endonuclease that mediates miRNA decay of both protein-free and AGO2-loaded miRNAs. (911 aa)    
Predicted Functional Partners:
ENSPFOP00000009271
Ribosomal protein S9.
   
 
 0.973
rps2
Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
  
 
 0.965
lrrc59
Leucine rich repeat containing 59.
   
 
 0.962
RPS20
Ribosomal protein S20.
    
   0.934
LOC103136996
Uncharacterized protein.
    
 
 0.898
LOC103135167
Metadherin a.
    
 
 0.898
ENSPFOP00000017355
NudC domain containing 1.
    
   0.880
piwil1
Piwi-like RNA-mediated gene silencing 1; Belongs to the argonaute family.
   
 0.879
rps3
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 
 0.876
ENSPFOP00000012206
Piwi-like RNA-mediated gene silencing 2; Belongs to the argonaute family.
   
 0.838
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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