Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC103156371Kelch-like ECH-associated protein 1a. (600 aa)    
Predicted Functional Partners:
nfe2l2
Nuclear factor, erythroid 2-like 2a.
    
 0.964
rbx1
Ring-box 1, E3 ubiquitin protein ligase.
    
 0.953
CUL3
Cullin 3; Belongs to the cullin family.
    
 0.945
ENSPFOP00000010423
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.945
LOC103152151
Si:rp71-68n21.9.
  
 
 
0.941
ENSPFOP00000011721
Kelch-like family member 13.
  
 
 
0.940
sqstm1
Sequestosome 1.
    
 0.936
ENSPFOP00000003472
Rho related BTB domain containing 4.
    
  0.912
rhobtb2
Rho related BTB domain containing 2a.
    
  0.912
keap1
Kelch-like ECH-associated protein 1b.
  
  
 
0.902
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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