Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ECM2Extracellular matrix protein 2. (733 aa)    
Predicted Functional Partners:
ogn
Osteoglycin, paralog a.
   
  
 0.544
ENSPFOP00000015912
WD repeat domain 90.
    
  0.476
cenpp
Centromere protein P.
      
 0.452
NCBP1
Nuclear cap binding protein subunit 1.
    
 
 0.436
eloc
Elongin C paralog a; Belongs to the SKP1 family.
    
  0.430
ENSPFOP00000000899
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
    
  0.420
cask
Uncharacterized protein; Belongs to the MAGUK family.
    
  0.420
ENSPFOP00000008692
Sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1.
   
  0.419
yrdc
YrdC N(6)-threonylcarbamoyltransferase domain containing.
      
 0.410
p3h1
Prolyl 3-hydroxylase 1.
      
 0.405
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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