Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
krr1KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (382 aa)    
Predicted Functional Partners:
ENSPFOP00000002096
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
   
 0.988
nop14
NOP14 nucleolar protein homolog (yeast).
   
 0.987
ENSPFOP00000011963
WD repeat domain 46.
   
 0.986
ddx52
DEAD (Asp-Glu-Ala-Asp) box polypeptide 52.
   
 0.986
utp18
WD_REPEATS_REGION domain-containing protein.
   
 0.985
LOC103143641
Ribosomal RNA processing 7 homolog A.
   
 0.984
utp3
UTP3 small subunit processome component.
   
 0.983
ngdn
Neuroguidin, EIF4E binding protein.
   
 0.982
UTP14C
UTP14C small subunit processome component.
   
 0.982
ENSPFOP00000015249
BMS1 ribosome biogenesis factor.
   
 0.979
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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