STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
thumpd3THUMP domain containing 3. (498 aa)    
Predicted Functional Partners:
ENSPFOP00000007356
Intersectin 2a.
   
 0.894
ENSPFOP00000011660
Intersectin 2b.
   
 0.894
itsn1
Intersectin 1 (SH3 domain protein).
   
 0.785
LOC103155900
Growth arrest-specific 7a.
    
 0.669
LOC103144464
Growth arrest specific 7.
    
 0.669
was
WASP actin nucleation promoting factor a.
   
 0.637
LOC103145954
Uncharacterized protein.
   
 0.637
ENSPFOP00000016312
WASP like actin nucleation promoting factor b.
   
 0.637
ENSPFOP00000016947
WASP like actin nucleation promoting factor a.
   
 0.637
LOC103143267
WH1 domain-containing protein.
   
 0.637
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.