Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DSC1 | LOC103131252 | ENSPFOP00000001630 | ENSPFOP00000003396 | Desmocollin 1; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. | Junction plakoglobin a. | 0.903 |
DSC1 | LOC103135024 | ENSPFOP00000001630 | ENSPFOP00000003743 | Desmocollin 1; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. | Uncharacterized protein. | 0.810 |
DSC1 | MACF1 | ENSPFOP00000001630 | ENSPFOP00000002322 | Desmocollin 1; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. | Microtubule actin crosslinking factor 1. | 0.717 |
DSC1 | ctnnb1 | ENSPFOP00000001630 | ENSPFOP00000018677 | Desmocollin 1; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. | Catenin (cadherin-associated protein), beta 1. | 0.810 |
ENSPFOP00000001876 | LOC103131252 | ENSPFOP00000001876 | ENSPFOP00000003396 | Transformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family. | Junction plakoglobin a. | 0.785 |
ENSPFOP00000001876 | LOC103135024 | ENSPFOP00000001876 | ENSPFOP00000003743 | Transformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family. | Uncharacterized protein. | 0.785 |
ENSPFOP00000001876 | MACF1 | ENSPFOP00000001876 | ENSPFOP00000002322 | Transformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family. | Microtubule actin crosslinking factor 1. | 0.642 |
ENSPFOP00000001876 | ctnnb1 | ENSPFOP00000001876 | ENSPFOP00000018677 | Transformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family. | Catenin (cadherin-associated protein), beta 1. | 0.888 |
ENSPFOP00000001876 | eny2 | ENSPFOP00000001876 | ENSPFOP00000019374 | Transformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family. | Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] | 0.990 |
ENSPFOP00000007356 | ENSPFOP00000008150 | ENSPFOP00000007356 | ENSPFOP00000008150 | Intersectin 2a. | Spectrin alpha, non-erythrocytic 1. | 0.992 |
ENSPFOP00000007356 | ENSPFOP00000011660 | ENSPFOP00000007356 | ENSPFOP00000011660 | Intersectin 2a. | Intersectin 2b. | 0.995 |
ENSPFOP00000007356 | MACF1 | ENSPFOP00000007356 | ENSPFOP00000002322 | Intersectin 2a. | Microtubule actin crosslinking factor 1. | 0.642 |
ENSPFOP00000008150 | ENSPFOP00000007356 | ENSPFOP00000008150 | ENSPFOP00000007356 | Spectrin alpha, non-erythrocytic 1. | Intersectin 2a. | 0.992 |
ENSPFOP00000008150 | ENSPFOP00000011660 | ENSPFOP00000008150 | ENSPFOP00000011660 | Spectrin alpha, non-erythrocytic 1. | Intersectin 2b. | 0.992 |
ENSPFOP00000008150 | MACF1 | ENSPFOP00000008150 | ENSPFOP00000002322 | Spectrin alpha, non-erythrocytic 1. | Microtubule actin crosslinking factor 1. | 0.696 |
ENSPFOP00000011660 | ENSPFOP00000007356 | ENSPFOP00000011660 | ENSPFOP00000007356 | Intersectin 2b. | Intersectin 2a. | 0.995 |
ENSPFOP00000011660 | ENSPFOP00000008150 | ENSPFOP00000011660 | ENSPFOP00000008150 | Intersectin 2b. | Spectrin alpha, non-erythrocytic 1. | 0.992 |
ENSPFOP00000011660 | MACF1 | ENSPFOP00000011660 | ENSPFOP00000002322 | Intersectin 2b. | Microtubule actin crosslinking factor 1. | 0.642 |
LOC103131252 | DSC1 | ENSPFOP00000003396 | ENSPFOP00000001630 | Junction plakoglobin a. | Desmocollin 1; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. | 0.903 |
LOC103131252 | ENSPFOP00000001876 | ENSPFOP00000003396 | ENSPFOP00000001876 | Junction plakoglobin a. | Transformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family. | 0.785 |
page 1 of 3