STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cwc15CWC15 spliceosome associated protein homolog. (238 aa)    
Predicted Functional Partners:
prpf19
Pre-mRNA processing factor 19.
    
 0.999
ENSPFOP00000010698
Catenin, beta like 1.
    
 0.999
plrg1
Pleiotropic regulator 1.
   
 0.999
cdc5l
CDC5 cell division cycle 5-like (S. pombe).
   
 0.999
bcas2
BCAS2 pre-mRNA processing factor.
   
 0.999
ENSPFOP00000003526
WW domain binding protein 11.
   
  0.997
snw1
SNW domain containing 1.
   
 
 0.996
bud31
BUD31 homolog.
   
 
 0.996
eftud2
Elongation factor Tu GTP binding domain containing 2.
    
 
 0.995
prpf8
Pre-mRNA processing factor 8.
    
 
 0.992
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.