STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103130748Uncharacterized protein. (1381 aa)    
Predicted Functional Partners:
ogt
O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1.
   
 0.956
ENSPFOP00000008277
Host cell factor C2.
     
 
0.918
ash2l
Ash2 like, histone lysine methyltransferase complex subunit.
    
 0.894
bap1
Ubiquitin carboxyl-terminal hydrolase.
    
 0.888
LOC103144569
WD repeat domain 5.
   
 0.849
LOC103144569-2
WD repeat-containing protein 5.
   
 0.849
uchl5
Ubiquitin carboxyl-terminal hydrolase.
    
 0.841
mcrs1
Microspherule protein 1.
    
 0.839
wsb1
WD repeat and SOCS box containing 1.
   
 0.831
wsb2
WD repeat and SOCS box containing 2.
   
 0.831
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.