STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
emc4ER membrane protein complex subunit 4; Belongs to the EMC4 family. (189 aa)    
Predicted Functional Partners:
ENSPFOP00000019363
ER membrane protein complex subunit 2.
   
 
 0.996
emc1
ER membrane protein complex subunit 1.
    
 
 0.995
emc6
ER membrane protein complex subunit 6.
   
 
 0.985
emc7
ER membrane protein complex subunit 7.
   
 
 0.982
mmgt1
Membrane magnesium transporter 1.
   
 
 0.974
emc10
ER membrane protein complex subunit 10.
   
 
 0.969
emc8
ER membrane protein complex subunit 8.
   
 
 0.969
LOC103150709
ER membrane protein complex subunit 3; Belongs to the EMC3 family.
   
 
 0.964
LOC103153490
ER membrane protein complex subunit 3; Belongs to the EMC3 family.
   
 
 0.964
vps28
Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.
    
 
 0.950
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.