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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000002808Interleukin 1 receptor accessory protein-like 2. (259 aa)    
Predicted Functional Partners:
IL1RAPL1
TIR domain-containing protein.
 
      0.876
LOC103146054
Protein tyrosine phosphatase receptor type Fb.
   
 0.777
ENSPFOP00000000910
Ig-like domain-containing protein.
   
 0.777
ENSPFOP00000002324
Uncharacterized protein.
   
 0.777
PTPRD
Protein tyrosine phosphatase receptor type D.
   
 0.777
ENSPFOP00000012155
Protein tyrosine phosphatase receptor type Sa.
   
 0.777
PTPRD-2
Uncharacterized protein.
   
 0.777
LOC103129985
Protein tyrosine phosphatase receptor type Sa.
   
 0.777
LOC103156223
Uncharacterized protein.
   
 0.777
LOC103154418
Interleukin-1.
   
 0.703
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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