STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103152770LHFPL tetraspan subfamily member 4a. (238 aa)    
Predicted Functional Partners:
ENSPFOP00000001451
Uncharacterized protein.
   
 0.653
LOC103149366
Uncharacterized protein.
   
 0.653
ENSPFOP00000013391
Protocadherin-related 15b.
   
 0.653
ENSPFOP00000015550
Protocadherin-related 15a.
   
 0.653
ENSPFOP00000022147
Uncharacterized protein.
   
 0.653
CIB2
Calcium and integrin binding family member 2.
   
 
 0.529
LOC103146059
Calcium and integrin binding family member 3.
   
 
 0.529
cib2
Calcium and integrin binding family member 2.
   
 
 0.529
TMC1
Transmembrane channel-like protein.
   
 
 0.503
ENSPFOP00000015459
Transmembrane channel-like protein.
   
 
 0.503
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.