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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103148914Cnn_1N domain-containing protein. (2283 aa)    
Predicted Functional Partners:
ENSPFOP00000005273
Malate synthase-like.
   
 
 0.762
espl1
Extra spindle pole bodies like 1, separase.
   
 0.637
ENSPFOP00000026836
Uncharacterized protein.
   
 
 0.630
LOC103135434
Phosphodiesterase.
   
 
 0.630
LOC103155147
Pericentrin.
    
 0.626
mapre1
Microtubule-associated protein, RP/EB family, member 1b.
    
 
 0.614
ENSPFOP00000003100
Methyltransferase like 11B.
      
 0.608
LOC103146974
Kinesin-associated protein 3b.
      
 0.608
pidd1
P53-induced death domain protein 1.
    
  0.603
ENSPFOP00000019455
DISC1 scaffold protein.
    
 
 0.602
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.