Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mef2cMyocyte enhancer factor 2cb. (472 aa)    
Predicted Functional Partners:
LOC103150485
Mitogen-activated protein kinase.
    
 0.980
LOC103152767
Mitogen-activated protein kinase.
    
 0.973
LOC103151778
Mitogen-activated protein kinase.
    
 0.973
LOC103151779
Mitogen-activated protein kinase.
    
 0.973
LOC103144386
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
    
 0.973
LOC103141200
Mitogen-activated protein kinase.
    
 0.973
LOC103144355
Mitogen-activated protein kinase.
    
 0.973
ENSPFOP00000000651
NK2 homeobox 5.
    
 0.912
LOC103156156
MADS-box domain-containing protein.
  
  
 
0.902
ENSPFOP00000001868
Myocyte enhancer factor 2b.
    
 0.890
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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