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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000003133Si:dkey-276j7.1. (213 aa)    
Predicted Functional Partners:
LOC103134210
Vang-like protein.
    
 0.660
LOC103144605
Vang-like protein.
    
 0.658
VANGL1
Vang-like protein.
    
 0.658
VANGL2
Vang-like protein.
    
 0.658
DVL1
Dishevelled segment polarity protein 1.
    
 0.647
ENSPFOP00000003910
annotation not available
    
 0.647
LOC103147008
Dishevelled segment polarity protein 3a.
    
 0.647
ENSPFOP00000010227
Uncharacterized protein.
    
 0.647
dvl2
Dishevelled segment polarity protein 2.
    
 0.647
traf6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.639
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.