Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000003133Si:dkey-276j7.1. (213 aa)    
Predicted Functional Partners:
dnal4
Dynein light chain.
    
   0.621
LOC103141120
Erb-b2 receptor tyrosine kinase 3b.
   
 
 0.608
LOC103133957
Androgen receptor.
    
 
 0.577
cnot1
CCR4-NOT transcription complex, subunit 1.
    
   0.564
ENSPFOP00000008805
GCM domain-containing protein.
   
   0.559
ENSPFOP00000017355
NudC domain containing 1.
    
   0.540
ENSPFOP00000028219
Uncharacterized protein.
    
 
 0.537
brca1
Uncharacterized protein.
    
   0.529
ccar1
Cell division cycle and apoptosis regulator 1.
    
   0.522
ENSPFOP00000008412
Zinc finger protein 131.
    
   0.521
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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