Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSPFOP00000003146 | ENSPFOP00000019214 | ENSPFOP00000003146 | ENSPFOP00000019214 | POU domain protein. | Atonal bHLH transcription factor 1a. | 0.516 |
ENSPFOP00000003146 | ENSPFOP00000019992 | ENSPFOP00000003146 | ENSPFOP00000019992 | POU domain protein. | Homeobox domain-containing protein. | 0.405 |
ENSPFOP00000003146 | LOC103133886 | ENSPFOP00000003146 | ENSPFOP00000019041 | POU domain protein. | Retinal outer segment membrane protein 1a. | 0.420 |
ENSPFOP00000003146 | LOC103134425 | ENSPFOP00000003146 | ENSPFOP00000003099 | POU domain protein. | PNPLA domain-containing protein. | 0.412 |
ENSPFOP00000003146 | VSX2 | ENSPFOP00000003146 | ENSPFOP00000013835 | POU domain protein. | Visual system homeobox 2. | 0.415 |
ENSPFOP00000003146 | ift88 | ENSPFOP00000003146 | ENSPFOP00000005853 | POU domain protein. | Intraflagellar transport 88 homolog. | 0.457 |
ENSPFOP00000003146 | pou6f1 | ENSPFOP00000003146 | ENSPFOP00000011581 | POU domain protein. | POU domain protein. | 0.401 |
ENSPFOP00000003146 | rnf128 | ENSPFOP00000003146 | ENSPFOP00000020419 | POU domain protein. | RING-type domain-containing protein. | 0.420 |
ENSPFOP00000003146 | sox10 | ENSPFOP00000003146 | ENSPFOP00000000132 | POU domain protein. | SRY-box transcription factor 10. | 0.479 |
ENSPFOP00000003146 | tp53 | ENSPFOP00000003146 | ENSPFOP00000007556 | POU domain protein. | Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. | 0.607 |
ENSPFOP00000019214 | ENSPFOP00000003146 | ENSPFOP00000019214 | ENSPFOP00000003146 | Atonal bHLH transcription factor 1a. | POU domain protein. | 0.516 |
ENSPFOP00000019992 | ENSPFOP00000003146 | ENSPFOP00000019992 | ENSPFOP00000003146 | Homeobox domain-containing protein. | POU domain protein. | 0.405 |
LOC103133886 | ENSPFOP00000003146 | ENSPFOP00000019041 | ENSPFOP00000003146 | Retinal outer segment membrane protein 1a. | POU domain protein. | 0.420 |
LOC103133886 | LOC103134425 | ENSPFOP00000019041 | ENSPFOP00000003099 | Retinal outer segment membrane protein 1a. | PNPLA domain-containing protein. | 0.558 |
LOC103133886 | rnf128 | ENSPFOP00000019041 | ENSPFOP00000020419 | Retinal outer segment membrane protein 1a. | RING-type domain-containing protein. | 0.618 |
LOC103134425 | ENSPFOP00000003146 | ENSPFOP00000003099 | ENSPFOP00000003146 | PNPLA domain-containing protein. | POU domain protein. | 0.412 |
LOC103134425 | LOC103133886 | ENSPFOP00000003099 | ENSPFOP00000019041 | PNPLA domain-containing protein. | Retinal outer segment membrane protein 1a. | 0.558 |
LOC103134425 | rnf128 | ENSPFOP00000003099 | ENSPFOP00000020419 | PNPLA domain-containing protein. | RING-type domain-containing protein. | 0.558 |
VSX2 | ENSPFOP00000003146 | ENSPFOP00000013835 | ENSPFOP00000003146 | Visual system homeobox 2. | POU domain protein. | 0.415 |
ift88 | ENSPFOP00000003146 | ENSPFOP00000005853 | ENSPFOP00000003146 | Intraflagellar transport 88 homolog. | POU domain protein. | 0.457 |
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