STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
clptm1lCLPTM1 like. (555 aa)    
Predicted Functional Partners:
ddx11
DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11.
    
 
 0.802
ENSPFOP00000011961
Mitotic arrest deficient 1 like 1.
    
 
 0.794
LOC103155071
MAD2 mitotic arrest deficient-like 1 (yeast).
    
   0.791
ENSPFOP00000004704
Structural maintenance of chromosomes protein.
    
   0.743
LOC103146032
Lysophosphatidylcholine acyltransferase 1.
   
  
 0.676
smc1a
Structural maintenance of chromosomes protein.
    
   0.662
LOC103147589
Structural maintenance of chromosomes protein.
    
   0.662
LPCAT1
Lysophosphatidylcholine acyltransferase 1.
   
  
 0.636
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 
 0.629
ncln
Nicalin.
   
  
 0.606
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.