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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aup1AUP1 lipid droplet regulating VLDL assembly factor. (416 aa)    
Predicted Functional Partners:
ube2g2
Ubiquitin-conjugating enzyme E2G 2 (UBC7 homolog, yeast); Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.970
ENSPFOP00000012320
SEL1L adaptor subunit of ERAD E3 ubiquitin ligase.
    
 
 0.793
ENSPFOP00000012451
SEL1L adaptor subunit of ERAD E3 ubiquitin ligase.
    
 
 0.793
pla2g4a
Phospholipase A2.
     
 0.783
ENSPFOP00000001243
Membrane bound O-acyltransferase domain containing 2b; Belongs to the membrane-bound acyltransferase family.
   
 0.743
mboat2
Membrane bound O-acyltransferase domain containing 2a; Belongs to the membrane-bound acyltransferase family.
   
 0.743
LOC103135897
1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
   
 
 0.737
crls1
Cardiolipin synthase 1.
  
 0.694
faf2
Fas associated factor family member 2.
    
 
 0.687
ephx2
Epoxide hydrolase 2, cytoplasmic.
  
 0.687
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.