Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
PACS1Phosphofurin acidic cluster sorting protein 1a. (906 aa)    
Predicted Functional Partners:
WDR37
WD_REPEATS_REGION domain-containing protein.
    
 
 0.923
ENSPFOP00000000419
WD repeat domain 37.
    
 
 0.923
fgfr1op
FGFR1 oncogene partner.
    
   0.901
gga3
Golgi associated, gamma adaptin ear containing, ARF binding protein 3a.
    
 
 0.781
snx24
Sorting nexin 24.
    
   0.674
tox4
TOX high mobility group box family member 4 b.
      
 0.576
LOC103137309
Transmembrane protein 33.
      
 0.545
mrpl38
Mitochondrial ribosomal protein L38.
      
 0.539
LOC103133531
Uncharacterized protein.
      
 0.513
gmppa
GDP-mannose pyrophosphorylase Ab.
      
 0.511
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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