Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000003255Hippocampus abundant transcript 1a. (492 aa)    
Predicted Functional Partners:
mfsd3
Major facilitator superfamily domain containing 3.
      
 0.679
psmc5
Proteasome 26S subunit, ATPase 5; Belongs to the AAA ATPase family.
    
   0.600
mfsd9
Major facilitator superfamily domain containing 9.
      
 0.567
slc46a2
Solute carrier family 46 member 2.
      
 0.512
ENSPFOP00000008724
tRNA methyltransferase 13 homolog.
      
 0.498
LOC103130831
Uncharacterized protein.
      
 0.497
mfsd5
Major facilitator superfamily domain containing 5.
      
 0.497
ENSPFOP00000006591
Solute carrier family 46 member 1.
      
 0.496
LOC103135956
Melanocyte proliferating gene 1.
      
 0.493
LOC103152303
Actin related protein 1, centractin.
   
  
 0.491
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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