Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
spon2Spondin 2b, extracellular matrix protein. (338 aa)    
Predicted Functional Partners:
gnl2
Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.
      
 0.886
rab28
Uncharacterized protein.
      
 0.853
ENSPFOP00000015012
Solute carrier family 38 member 10.
      
 0.843
LOC103147857
Family with sequence similarity 163 member B, genome duplicate a.
      
 0.832
ENSPFOP00000017908
Lipase maturation factor; Involved in the maturation of specific proteins in the endoplasmic reticulum; Belongs to the lipase maturation factor family.
      
 0.743
ENSPFOP00000013284
NRDE-2, necessary for RNA interference, domain containing.
      
 0.725
neto1
Neuropilin (NRP) and tolloid (TLL)-like 1, like.
      
 0.712
chchd7
Coiled-coil-helix-coiled-coil-helix domain containing 7.
      
 0.712
ENSPFOP00000014315
Neuropilin (NRP) and tolloid (TLL)-like 1.
      
 0.712
tpx2
TPX2 microtubule nucleation factor.
      
 0.685
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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