LOC103143867 protein (Poecilia formosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Poecilia formosa

NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CSNK1A1	ENSPFOP00000003124	ENSPFOP00000027007	ENSPFOP00000003124	Casein kinase 1 alpha 1; Belongs to the protein kinase superfamily.	Damage-specific DNA binding protein 1.	0.462
CSNK1A1	LOC103143867	ENSPFOP00000027007	ENSPFOP00000003389	Casein kinase 1 alpha 1; Belongs to the protein kinase superfamily.	Regulator of G protein signaling 2.	0.630
ENSPFOP00000003124	CSNK1A1	ENSPFOP00000003124	ENSPFOP00000027007	Damage-specific DNA binding protein 1.	Casein kinase 1 alpha 1; Belongs to the protein kinase superfamily.	0.462
ENSPFOP00000003124	LOC103143867	ENSPFOP00000003124	ENSPFOP00000003389	Damage-specific DNA binding protein 1.	Regulator of G protein signaling 2.	0.718
ENSPFOP00000003124	cct5	ENSPFOP00000003124	ENSPFOP00000001507	Damage-specific DNA binding protein 1.	Chaperonin containing TCP1, subunit 5 (epsilon).	0.819
ENSPFOP00000014254	LOC103143867	ENSPFOP00000014254	ENSPFOP00000003389	RING-CH-type domain-containing protein.	Regulator of G protein signaling 2.	0.646
GNA14	LOC103135363	ENSPFOP00000018515	ENSPFOP00000018531	Guanine nucleotide binding protein (G protein), alpha 14a.	Uncharacterized protein.	0.638
GNA14	LOC103142608	ENSPFOP00000018515	ENSPFOP00000018940	Guanine nucleotide binding protein (G protein), alpha 14a.	Guanine nucleotide binding protein (G protein), alpha 11a (Gq class).	0.545
GNA14	LOC103143867	ENSPFOP00000018515	ENSPFOP00000003389	Guanine nucleotide binding protein (G protein), alpha 14a.	Regulator of G protein signaling 2.	0.688
GNA14	LOC103146574	ENSPFOP00000018515	ENSPFOP00000014503	Guanine nucleotide binding protein (G protein), alpha 14a.	Guanine nucleotide binding protein (G protein), alpha 11b (Gq class).	0.545
LOC103135359	LOC103143867	ENSPFOP00000031046	ENSPFOP00000003389	Guanine nucleotide-binding protein subunit alpha-14-like.	Regulator of G protein signaling 2.	0.688
LOC103135363	GNA14	ENSPFOP00000018531	ENSPFOP00000018515	Uncharacterized protein.	Guanine nucleotide binding protein (G protein), alpha 14a.	0.638
LOC103135363	LOC103142608	ENSPFOP00000018531	ENSPFOP00000018940	Uncharacterized protein.	Guanine nucleotide binding protein (G protein), alpha 11a (Gq class).	0.543
LOC103135363	LOC103143867	ENSPFOP00000018531	ENSPFOP00000003389	Uncharacterized protein.	Regulator of G protein signaling 2.	0.688
LOC103135363	LOC103146574	ENSPFOP00000018531	ENSPFOP00000014503	Uncharacterized protein.	Guanine nucleotide binding protein (G protein), alpha 11b (Gq class).	0.543
LOC103142608	GNA14	ENSPFOP00000018940	ENSPFOP00000018515	Guanine nucleotide binding protein (G protein), alpha 11a (Gq class).	Guanine nucleotide binding protein (G protein), alpha 14a.	0.545
LOC103142608	LOC103135363	ENSPFOP00000018940	ENSPFOP00000018531	Guanine nucleotide binding protein (G protein), alpha 11a (Gq class).	Uncharacterized protein.	0.543
LOC103142608	LOC103143867	ENSPFOP00000018940	ENSPFOP00000003389	Guanine nucleotide binding protein (G protein), alpha 11a (Gq class).	Regulator of G protein signaling 2.	0.688
LOC103142608	LOC103146574	ENSPFOP00000018940	ENSPFOP00000014503	Guanine nucleotide binding protein (G protein), alpha 11a (Gq class).	Guanine nucleotide binding protein (G protein), alpha 11b (Gq class).	0.543
LOC103143867	CSNK1A1	ENSPFOP00000003389	ENSPFOP00000027007	Regulator of G protein signaling 2.	Casein kinase 1 alpha 1; Belongs to the protein kinase superfamily.	0.630