Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000003545WAPL cohesin release factor b. (1200 aa)    
Predicted Functional Partners:
ENSPFOP00000004704
Structural maintenance of chromosomes protein.
   
 0.990
pds5a
PDS5 cohesin associated factor A.
   
 0.975
pds5b
PDS5 cohesin associated factor B.
   
 0.964
ENSPFOP00000001674
Cell division cycle associated 5.
    
 0.954
smc1a
Structural maintenance of chromosomes protein.
   
 0.952
LOC103147589
Structural maintenance of chromosomes protein.
   
 0.952
LOC103154570
RAD21 cohesin complex component.
    
 0.928
ENSPFOP00000004552
RAD21 cohesin complex component like 1.
    
 0.928
LOC103135049
RAD21 cohesin complex component a.
    
 0.928
wapl
WAPL cohesin release factor a.
  
  
 
0.902
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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