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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000003631Solute carrier family 13 member 5b. (541 aa)    
Predicted Functional Partners:
mlycd
Malonyl-CoA decarboxylase.
    
 0.728
ENSPFOP00000000087
Amino acid transporter.
    
 0.573
ENSPFOP00000000568
Amino acid transporter.
    
 0.573
ENSPFOP00000002344
Uncharacterized protein.
    
 0.573
ENSPFOP00000003251
Amino acid transporter.
    
 0.573
ENSPFOP00000004310
Amino acid transporter.
    
 0.573
LOC103138919
Uncharacterized protein.
    
 0.573
ENSPFOP00000005714
Amino acid transporter.
    
 0.573
LOC103153958
Amino acid transporter.
    
 0.573
slc1a5
Amino acid transporter.
    
 0.573
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.