STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000003948Crystallin, zeta (quinone reductase)-like 1. (313 aa)    
Predicted Functional Partners:
ppp1r21
Protein phosphatase 1, regulatory subunit 21.
    
   0.900
suox
Sulfite oxidase.
    
 0.889
ENSPFOP00000001219
Hydroxysteroid dehydrogenase like 2.
  
 0.815
ENSPFOP00000011301
Xylulokinase homolog (H. influenzae).
    
 0.778
cryl1
Crystallin, lambda 1.
  
 
 0.759
ENSPFOP00000009158
Carrier domain-containing protein.
  
 0.746
LOC103140579
Si:dkey-61p9.11.
  
 0.746
ENSPFOP00000012392
Coiled-coil domain containing 57.
  
0.746
LOC107836512
Carrier domain-containing protein.
  
 0.746
ENSPFOP00000010208
Alcohol dehydrogenase iron containing 1.
    
 0.739
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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