Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSPFOP00000019162 | cebpz | ENSPFOP00000019162 | ENSPFOP00000003990 | NOC2-like nucleolar associated transcriptional repressor. | CCAAT enhancer binding protein zeta. | 0.999 |
ENSPFOP00000019162 | ddx18 | ENSPFOP00000019162 | ENSPFOP00000000983 | NOC2-like nucleolar associated transcriptional repressor. | RNA helicase. | 0.997 |
ENSPFOP00000019162 | ddx56 | ENSPFOP00000019162 | ENSPFOP00000018770 | NOC2-like nucleolar associated transcriptional repressor. | DEAD (Asp-Glu-Ala-Asp) box helicase 56. | 0.972 |
ENSPFOP00000019162 | gtpbp4 | ENSPFOP00000019162 | ENSPFOP00000000024 | NOC2-like nucleolar associated transcriptional repressor. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.996 |
ENSPFOP00000019162 | mphosph10 | ENSPFOP00000019162 | ENSPFOP00000004768 | NOC2-like nucleolar associated transcriptional repressor. | U3 small nucleolar ribonucleoprotein protein MPP10; Component of the 60-80S U3 small nucleolar ribonucleoprotein (U3 snoRNP). Required for the early cleavages during pre-18S ribosomal RNA processing; Belongs to the MPP10 family. | 0.896 |
ENSPFOP00000019162 | pdcd11 | ENSPFOP00000019162 | ENSPFOP00000006127 | NOC2-like nucleolar associated transcriptional repressor. | Programmed cell death 11. | 0.997 |
ENSPFOP00000019162 | pes1 | ENSPFOP00000019162 | ENSPFOP00000014914 | NOC2-like nucleolar associated transcriptional repressor. | Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.999 |
ENSPFOP00000019162 | rbm28 | ENSPFOP00000019162 | ENSPFOP00000018328 | NOC2-like nucleolar associated transcriptional repressor. | RNA binding motif protein 28. | 0.993 |
ENSPFOP00000019162 | rbm34 | ENSPFOP00000019162 | ENSPFOP00000009888 | NOC2-like nucleolar associated transcriptional repressor. | Uncharacterized protein. | 0.971 |
ENSPFOP00000019162 | rpf2 | ENSPFOP00000019162 | ENSPFOP00000003401 | NOC2-like nucleolar associated transcriptional repressor. | Ribosome production factor 2 homolog. | 0.999 |
cebpz | ENSPFOP00000019162 | ENSPFOP00000003990 | ENSPFOP00000019162 | CCAAT enhancer binding protein zeta. | NOC2-like nucleolar associated transcriptional repressor. | 0.999 |
cebpz | ddx18 | ENSPFOP00000003990 | ENSPFOP00000000983 | CCAAT enhancer binding protein zeta. | RNA helicase. | 0.987 |
cebpz | ddx56 | ENSPFOP00000003990 | ENSPFOP00000018770 | CCAAT enhancer binding protein zeta. | DEAD (Asp-Glu-Ala-Asp) box helicase 56. | 0.993 |
cebpz | gtpbp4 | ENSPFOP00000003990 | ENSPFOP00000000024 | CCAAT enhancer binding protein zeta. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.992 |
cebpz | mphosph10 | ENSPFOP00000003990 | ENSPFOP00000004768 | CCAAT enhancer binding protein zeta. | U3 small nucleolar ribonucleoprotein protein MPP10; Component of the 60-80S U3 small nucleolar ribonucleoprotein (U3 snoRNP). Required for the early cleavages during pre-18S ribosomal RNA processing; Belongs to the MPP10 family. | 0.987 |
cebpz | pdcd11 | ENSPFOP00000003990 | ENSPFOP00000006127 | CCAAT enhancer binding protein zeta. | Programmed cell death 11. | 0.999 |
cebpz | pes1 | ENSPFOP00000003990 | ENSPFOP00000014914 | CCAAT enhancer binding protein zeta. | Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.987 |
cebpz | rbm28 | ENSPFOP00000003990 | ENSPFOP00000018328 | CCAAT enhancer binding protein zeta. | RNA binding motif protein 28. | 0.993 |
cebpz | rbm34 | ENSPFOP00000003990 | ENSPFOP00000009888 | CCAAT enhancer binding protein zeta. | Uncharacterized protein. | 0.985 |
cebpz | rpf2 | ENSPFOP00000003990 | ENSPFOP00000003401 | CCAAT enhancer binding protein zeta. | Ribosome production factor 2 homolog. | 0.988 |
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