LOC103141865 protein (Poecilia formosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Poecilia formosa

NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC103134577	LOC103141865	ENSPFOP00000013613	ENSPFOP00000004075	Ras homolog family member Ca.	IL6Ra-bind domain-containing protein.	0.904
LOC103134577	LOC103147374	ENSPFOP00000013613	ENSPFOP00000004976	Ras homolog family member Ca.	IL2RB_N1 domain-containing protein.	0.904
LOC103134577	LOC103156074	ENSPFOP00000013613	ENSPFOP00000025021	Ras homolog family member Ca.	IL2RB_N1 domain-containing protein.	0.900
LOC103138302	LOC103141865	ENSPFOP00000019175	ENSPFOP00000004075	Uncharacterized protein.	IL6Ra-bind domain-containing protein.	0.904
LOC103138302	LOC103147374	ENSPFOP00000019175	ENSPFOP00000004976	Uncharacterized protein.	IL2RB_N1 domain-containing protein.	0.904
LOC103138302	LOC103156074	ENSPFOP00000019175	ENSPFOP00000025021	Uncharacterized protein.	IL2RB_N1 domain-containing protein.	0.900
LOC103141865	LOC103134577	ENSPFOP00000004075	ENSPFOP00000013613	IL6Ra-bind domain-containing protein.	Ras homolog family member Ca.	0.904
LOC103141865	LOC103138302	ENSPFOP00000004075	ENSPFOP00000019175	IL6Ra-bind domain-containing protein.	Uncharacterized protein.	0.904
LOC103141865	LOC103147374	ENSPFOP00000004075	ENSPFOP00000004976	IL6Ra-bind domain-containing protein.	IL2RB_N1 domain-containing protein.	0.998
LOC103141865	LOC103149604	ENSPFOP00000004075	ENSPFOP00000000695	IL6Ra-bind domain-containing protein.	Uncharacterized protein.	0.904
LOC103141865	LOC103149647	ENSPFOP00000004075	ENSPFOP00000005276	IL6Ra-bind domain-containing protein.	Uncharacterized protein.	0.904
LOC103141865	LOC103150799	ENSPFOP00000004075	ENSPFOP00000011171	IL6Ra-bind domain-containing protein.	Uncharacterized protein.	0.912
LOC103141865	LOC103154003	ENSPFOP00000004075	ENSPFOP00000000151	IL6Ra-bind domain-containing protein.	Uncharacterized protein.	0.904
LOC103141865	LOC103154239	ENSPFOP00000004075	ENSPFOP00000017610	IL6Ra-bind domain-containing protein.	Uncharacterized protein.	0.904
LOC103141865	LOC103156074	ENSPFOP00000004075	ENSPFOP00000025021	IL6Ra-bind domain-containing protein.	IL2RB_N1 domain-containing protein.	0.900
LOC103141865	alg14	ENSPFOP00000004075	ENSPFOP00000009276	IL6Ra-bind domain-containing protein.	ALG14 UDP-N-acetylglucosaminyltransferase subunit.	0.929
LOC103147374	LOC103134577	ENSPFOP00000004976	ENSPFOP00000013613	IL2RB_N1 domain-containing protein.	Ras homolog family member Ca.	0.904
LOC103147374	LOC103138302	ENSPFOP00000004976	ENSPFOP00000019175	IL2RB_N1 domain-containing protein.	Uncharacterized protein.	0.904
LOC103147374	LOC103141865	ENSPFOP00000004976	ENSPFOP00000004075	IL2RB_N1 domain-containing protein.	IL6Ra-bind domain-containing protein.	0.998
LOC103147374	LOC103149604	ENSPFOP00000004976	ENSPFOP00000000695	IL2RB_N1 domain-containing protein.	Uncharacterized protein.	0.904