ENSPFOP00000004097 protein (Poecilia formosa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Poecilia formosa

NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPFOP00000002806	ENSPFOP00000003440	ENSPFOP00000002806	ENSPFOP00000003440	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.997
ENSPFOP00000002806	ENSPFOP00000004097	ENSPFOP00000002806	ENSPFOP00000004097	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	Uncharacterized protein.	0.961
ENSPFOP00000002806	gtf2a2	ENSPFOP00000002806	ENSPFOP00000000045	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.	0.991
ENSPFOP00000002806	taf10	ENSPFOP00000002806	ENSPFOP00000011539	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.999
ENSPFOP00000002806	taf11	ENSPFOP00000002806	ENSPFOP00000008957	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.999
ENSPFOP00000002806	taf12	ENSPFOP00000002806	ENSPFOP00000014528	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.999
ENSPFOP00000002806	taf2	ENSPFOP00000002806	ENSPFOP00000007452	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.999
ENSPFOP00000002806	taf3	ENSPFOP00000002806	ENSPFOP00000013193	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated facto.	0.996
ENSPFOP00000002806	taf7	ENSPFOP00000002806	ENSPFOP00000013997	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.996
ENSPFOP00000002806	taf8	ENSPFOP00000002806	ENSPFOP00000000394	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.999
ENSPFOP00000003440	ENSPFOP00000002806	ENSPFOP00000003440	ENSPFOP00000002806	TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.997
ENSPFOP00000003440	ENSPFOP00000004097	ENSPFOP00000003440	ENSPFOP00000004097	TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	Uncharacterized protein.	0.958
ENSPFOP00000003440	gtf2a2	ENSPFOP00000003440	ENSPFOP00000000045	TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.	0.988
ENSPFOP00000003440	taf10	ENSPFOP00000003440	ENSPFOP00000011539	TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.997
ENSPFOP00000003440	taf11	ENSPFOP00000003440	ENSPFOP00000008957	TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.999
ENSPFOP00000003440	taf12	ENSPFOP00000003440	ENSPFOP00000014528	TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.999
ENSPFOP00000003440	taf2	ENSPFOP00000003440	ENSPFOP00000007452	TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.999
ENSPFOP00000003440	taf3	ENSPFOP00000003440	ENSPFOP00000013193	TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated facto.	0.999
ENSPFOP00000003440	taf7	ENSPFOP00000003440	ENSPFOP00000013997	TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.999
ENSPFOP00000003440	taf8	ENSPFOP00000003440	ENSPFOP00000000394	TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.999