STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000004232Matrin-type domain-containing protein. (713 aa)    
Predicted Functional Partners:
ENSPFOP00000013648
Heterogeneous nuclear ribonucleoprotein K, like.
   
 
 0.725
hnrnpk
Heterogeneous nuclear ribonucleoprotein K.
   
 
 0.725
hnrnpm
Heterogeneous nuclear ribonucleoprotein M.
   
 
 0.679
ENSPFOP00000028219
Uncharacterized protein.
   
  0.673
LOC103138913
TAR DNA binding protein, like.
   
 
 0.669
LOC103137072
TAR DNA binding protein.
   
 
 0.669
ENSPFOP00000016493
Non-POU domain containing, octamer-binding.
   
 
 0.627
ENSPFOP00000003361
Receptor-interacting serine-threonine kinase 3; Belongs to the protein kinase superfamily.
   
  0.616
ripk4
Receptor-interacting serine-threonine kinase 4.
   
  0.616
PTK7
Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
  0.615
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.