Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103155680Lymphoid-restricted membrane protein. (1529 aa)    
Predicted Functional Partners:
LOC103141596
Sad1 and UNC84 domain containing 1.
    
 
 0.868
ENSPFOP00000023182
SUN domain-containing protein.
    
 
 0.843
ENSPFOP00000001436
SAS-6 centriolar assembly protein.
    
 0.726
dhx16
DEAH (Asp-Glu-Ala-His) box polypeptide 16.
    
 
 0.718
ENSPFOP00000005129
Si:dkey-121j17.5; Belongs to the protein kinase superfamily.
   
 0.604
ENSPFOP00000007334
cGMP-dependent protein kinase.
   
 0.604
prkg2
cGMP-dependent protein kinase.
   
 0.604
ENSPFOP00000015658
cGMP-dependent protein kinase.
   
 0.604
LOC103143189
Marker of proliferation Ki-67.
    
 0.586
ACSF3
Acyl-CoA synthetase family member 3.
    
 
 0.555
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.