Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
maco1Macoilin 1b. (679 aa)    
Predicted Functional Partners:
ENSPFOP00000004074
SYF2 pre-mRNA-splicing factor.
   
  
 0.721
sugt1
SGT1 homolog, MIS12 kinetochore complex assembly cochaperone.
      
 0.701
rsrp1
Arginine/serine-rich protein 1.
      
 0.680
LOC103153619
Rh blood group, D antigen; Belongs to the ammonium transporter (TC 2.A.49) family. Rh subfamily.
      
 0.680
tmem50a
Transmembrane protein 50A.
      
 0.680
ENSPFOP00000009988
C2cd2 like.
      
 0.676
ENSPFOP00000016111
Death effector domain-containing 1.
      
 0.592
ilkap
Integrin-linked kinase-associated serine/threonine phosphatase.
      
 0.584
lcmt1
Leucine carboxyl methyltransferase 1; Methylates the carboxyl group of the C-terminal leucine residue of protein phosphatase 2A catalytic subunits to form alpha- leucine ester residues; Belongs to the methyltransferase superfamily. LCMT family.
      
 0.567
ENSPFOP00000011347
SRP receptor subunit beta.
      
 0.549
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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