Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103138713Solute carrier family 7 member 3a. (650 aa)    
Predicted Functional Partners:
ENSPFOP00000014250
RWD domain containing 4.
      
 0.682
LOC103148820
Stathmin; Belongs to the stathmin family.
   
 
 0.591
ENSPFOP00000002217
Uncharacterized protein.
      
 0.586
slc16a10
Solute carrier family 16 member 10.
      
 0.577
SLC16A2
Solute carrier family 16 member 2.
      
 0.577
slc38a8
Solute carrier family 38 member 8a.
      
 0.574
LOC103129387
2-epi-5-epi-valiolone synthase.
   
 0.573
ENSPFOP00000007326
DHQ_synthase domain-containing protein.
   
 0.573
LOC103136472
Coiled-coil domain containing 114.
     
 0.563
LOC103154479
Uncharacterized protein.
  
 
0.539
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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