STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000004438Angiomotin. (612 aa)    
Predicted Functional Partners:
nf2
Neurofibromin 2a (merlin).
    
 0.978
LOC103139469
Neurofibromin 2b (merlin).
    
 0.976
ENSPFOP00000014762
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
    
 0.958
MPDZ-2
Si:dkey-92j12.5.
    
 0.947
MPDZ
Multiple PDZ domain crumbs cell polarity complex component.
    
 0.943
ENSPFOP00000022167
Uncharacterized protein.
    
 0.943
ENSPFOP00000002736
PATJ crumbs cell polarity complex component.
    
 0.937
LOC103132354
Uncharacterized protein.
    
 0.935
arhgap17
Rho GTPase activating protein 17b.
    
 0.935
amotl2
Angiomotin like 2a.
    
0.929
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.