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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103143083Paraoxonase 1. (355 aa)    
Predicted Functional Partners:
LOC103143082
Uncharacterized protein.
  
0.846
nfyc
Nuclear transcription factor Y, gamma.
    
   0.590
ENSPFOP00000002301
Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.
      
 0.503
ENSPFOP00000012664
Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.
      
 0.497
stoml1
Stomatin (EPB72)-like 1.
    
 
 0.459
chrac1
Chromatin accessibility complex subunit 1.
    
   0.400
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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